BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C03SP1|AL426332
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig216 1514 0.0
>3x_Contig216
Length = 1898
Score = 1514 bits (758), Expect = 0.0
Identities = 777/788 (98%), Gaps = 1/788 (0%)
Strand = Plus / Plus
Query: 1 ggcttgttccaaggtsgtacaggcggcaccaattgatctgaataaatgtgacattgtgaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcttgttccaaggtcgtacaggcggcaccaattgatctgaataaatgtgacattgtgaa 499
Query: 61 tgttgatgtaattgcaattaakaaatagaaaaadaaatgacctggtgaccttctgaaatt 120
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 tgttgatgtaattgcaattaagaaatagaaaaagaaatgacctggtgaccttctgaaatt 559
Query: 121 aactaagaagtaataaattaaattgaagcaaatagcgatgataaamttagatggtaattc 180
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 560 aactaagaagtaatagattaaattgaagcaaatagcgatgataaacttagatggtaattc 619
Query: 181 ggtaataattgatgccaaarcatctgctgaaggacgataaaatgcataggttttatgctt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtaataattgatgccaaagcatctgctgaaggacgataaaatgcataggttttatgctt 679
Query: 241 ctcgacaatctttcttgcctcaaacaaggaaagaatttctaataaaraaccaaaggagtt 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 680 ctcgacaatctttcttgcctcaaacaaggaaagaatttctaataaagaaccaaaggagtt 739
Query: 301 aaacaaaagcgccgtgaaaagcgca-cagtcctgtagtaaaatgaaccggtattatcctt 359
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 740 aaacaaaagcgccgtgaaaagcgcagcagtcctgtagtaaaatgaaccggtattatcctt 799
Query: 360 ttggttataaaamatagaagaaatgatgaaagccatcgagcaattaccaaaaatgttaaa 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttggttataaaacatagaagaaatgatgaaagccatcgagcaattaccaaaaatgttaaa 859
Query: 420 tgcgtaaacagatgggtcacctttaagtctctggacgtttctgtccatgacggctttcac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tgcgtaaacagatgggtcacctttaagtctctggacgtttctgtccatgacggctttcac 919
Query: 480 ttgcatcataaatrataaaaggaagggtgaagatgacttggaatgcttcgattgacgagc 539
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ttgcatcataaatgataaaaggaagggtgaagatgacttggaatgcttcgattgacgagc 979
Query: 540 agtgtgatgatcgaaaaamtcttttgcgctatcctcattgttatgtttattcaaataggc 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 agtgtgatgatcgaaaaactcttttgcgctatcctcattgttatgtttattcaaataggc 1039
Query: 600 atcaatcctgttcattagttgggcatattcagatgatgatttccaatgctcataaaattc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 atcaatcctgttcattagttgggcatattcagatgatgatttccaatgctcataaaattc 1099
Query: 660 gtcaggtgtcttaggaaccttcttttcgtagcctggtctacactttctttcattagcagc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 gtcaggtgtcttaggaaccttcttttcgtagcctggtctacactttctttcattagcagc 1159
Query: 720 agttactgatgttaagaaatctgcagtcgtttgtctatcaggacactcccaacccatatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 agttactgatgttaagaaatctgcagtcgtttgtctatcaggacactcccaacccatatc 1219
Query: 780 caagaagt 787
||||||||
Sbjct: 1220 caagaagt 1227
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5435
Number of Sequences: 1807
Number of extensions: 5435
Number of successful extensions: 134
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)